1 | /* |
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2 | * Copyright (C) 2013 DASISH |
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3 | * |
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4 | * This program is free software; you can redistribute it and/or |
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5 | * modify it under the terms of the GNU General Public License |
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6 | * as published by the Free Software Foundation; either version 2 |
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7 | * of the License, or (at your option) any later version. |
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8 | * |
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9 | * This program is distributed in the hope that it will be useful, |
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10 | * but WITHOUT ANY WARRANTY; without even the implied warranty of |
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11 | * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the |
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12 | * GNU General Public License for more details. |
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13 | * |
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14 | * You should have received a copy of the GNU General Public License |
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15 | * along with this program; if not, write to the Free Software |
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16 | * Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA. |
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17 | */ |
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18 | package eu.dasish.annotation.backend.dao.impl; |
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19 | |
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20 | import eu.dasish.annotation.backend.Resource; |
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21 | import eu.dasish.annotation.backend.Helpers; |
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22 | import eu.dasish.annotation.backend.dao.AnnotationDao; |
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23 | import eu.dasish.annotation.backend.dao.CachedRepresentationDao; |
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24 | import eu.dasish.annotation.backend.dao.DBIntegrityService; |
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25 | import eu.dasish.annotation.backend.dao.NotebookDao; |
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26 | import eu.dasish.annotation.backend.dao.ResourceDao; |
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27 | import eu.dasish.annotation.backend.dao.TargetDao; |
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28 | import eu.dasish.annotation.backend.dao.UserDao; |
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29 | import eu.dasish.annotation.backend.rest.AnnotationResource; |
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30 | import eu.dasish.annotation.schema.Action; |
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31 | import eu.dasish.annotation.schema.ActionList; |
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32 | import eu.dasish.annotation.schema.Annotation; |
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33 | import eu.dasish.annotation.schema.AnnotationActionName; |
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34 | import eu.dasish.annotation.schema.AnnotationBody; |
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35 | import eu.dasish.annotation.schema.AnnotationInfo; |
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36 | import eu.dasish.annotation.schema.AnnotationInfoList; |
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37 | import eu.dasish.annotation.schema.CachedRepresentationFragment; |
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38 | import eu.dasish.annotation.schema.CachedRepresentationFragmentList; |
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39 | import eu.dasish.annotation.schema.CachedRepresentationInfo; |
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40 | import eu.dasish.annotation.schema.Notebook; |
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41 | import eu.dasish.annotation.schema.NotebookInfo; |
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42 | import eu.dasish.annotation.schema.NotebookInfoList; |
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43 | import eu.dasish.annotation.schema.TargetInfoList; |
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44 | import eu.dasish.annotation.schema.Permission; |
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45 | import eu.dasish.annotation.schema.PermissionActionName; |
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46 | import eu.dasish.annotation.schema.UserWithPermissionList; |
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47 | import eu.dasish.annotation.schema.ReferenceList; |
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48 | import eu.dasish.annotation.schema.ResponseBody; |
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49 | import eu.dasish.annotation.schema.Target; |
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50 | import eu.dasish.annotation.schema.TargetInfo; |
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51 | import eu.dasish.annotation.schema.User; |
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52 | import eu.dasish.annotation.schema.UserWithPermission; |
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53 | import java.io.InputStream; |
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54 | import java.lang.Number; |
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55 | import java.util.ArrayList; |
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56 | import java.util.HashMap; |
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57 | import java.util.List; |
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58 | import java.util.Map; |
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59 | import java.util.UUID; |
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60 | import java.lang.reflect.Field; |
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61 | import org.springframework.beans.factory.annotation.Autowired; |
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62 | import org.slf4j.Logger; |
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63 | import org.slf4j.LoggerFactory; |
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64 | |
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65 | /** |
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66 | * |
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67 | * @author olhsha |
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68 | */ |
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69 | public class DBIntegrityServiceImlp implements DBIntegrityService { |
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70 | |
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71 | @Autowired |
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72 | UserDao userDao; |
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73 | @Autowired |
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74 | CachedRepresentationDao cachedRepresentationDao; |
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75 | @Autowired |
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76 | TargetDao targetDao; |
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77 | @Autowired |
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78 | AnnotationDao annotationDao; |
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79 | @Autowired |
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80 | NotebookDao notebookDao; |
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81 | private String remoteUser=null; |
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82 | |
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83 | |
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84 | final static protected String admin = "admin"; |
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85 | private static final Logger logger = LoggerFactory.getLogger(DBIntegrityServiceImlp.class); |
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86 | |
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87 | ////////////////////////////////// |
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88 | private ResourceDao getDao(Resource resource) { |
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89 | switch (resource) { |
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90 | case PRINCIPAL: |
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91 | return userDao; |
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92 | case ANNOTATION: |
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93 | return annotationDao; |
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94 | case TARGET: |
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95 | return targetDao; |
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96 | case CACHED_REPRESENTATION: |
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97 | return cachedRepresentationDao; |
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98 | case NOTEBOOK: |
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99 | return notebookDao; |
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100 | default: |
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101 | return null; |
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102 | } |
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103 | } |
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104 | |
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105 | public String getRemoteUser(){ |
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106 | return remoteUser; |
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107 | } |
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108 | |
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109 | public void setRemoteUser(String currentUser){ |
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110 | remoteUser = currentUser; |
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111 | } |
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112 | |
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113 | |
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114 | @Override |
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115 | public void setServiceURI(String serviceURI) { |
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116 | userDao.setServiceURI(serviceURI + "users/"); |
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117 | cachedRepresentationDao.setServiceURI(serviceURI + "cached/"); |
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118 | targetDao.setServiceURI(serviceURI + "targets/"); |
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119 | annotationDao.setServiceURI(serviceURI + "annotations/"); |
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120 | notebookDao.setServiceURI(serviceURI + "notebooks/"); |
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121 | } |
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122 | |
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123 | ///////////// GETTERS ////////////////////////// |
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124 | @Override |
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125 | public Number getResourceInternalIdentifier(UUID externalID, Resource resource) { |
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126 | return this.getDao(resource).getInternalID(externalID); |
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127 | } |
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128 | |
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129 | @Override |
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130 | public Number getResourceInternalIdentifierFromURI(String uri, Resource resource) { |
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131 | return this.getDao(resource).getInternalIDFromURI(uri); |
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132 | } |
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133 | |
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134 | @Override |
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135 | public UUID getResourceExternalIdentifier(Number resourceID, Resource resource) { |
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136 | return this.getDao(resource).getExternalID(resourceID); |
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137 | } |
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138 | |
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139 | @Override |
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140 | public String getResourceURI(Number resourceID, Resource resource) { |
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141 | return this.getDao(resource).getURIFromInternalID(resourceID); |
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142 | } |
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143 | |
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144 | @Override |
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145 | public Annotation getAnnotation(Number annotationID) { |
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146 | if (annotationID != null) { |
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147 | Annotation result = annotationDao.getAnnotationWithoutTargetsAndPermissions(annotationID); |
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148 | result.setOwnerRef(userDao.getURIFromInternalID(annotationDao.getOwner(annotationID))); |
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149 | List<Number> targetIDs = targetDao.retrieveTargetIDs(annotationID); |
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150 | TargetInfoList sis = new TargetInfoList(); |
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151 | for (Number targetID : targetIDs) { |
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152 | TargetInfo targetInfo = getTargetInfoFromTarget(targetDao.getTarget(targetID)); |
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153 | sis.getTargetInfo().add(targetInfo); |
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154 | } |
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155 | result.setTargets(sis); |
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156 | |
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157 | result.setPermissions(this.getPermissions(annotationID, Resource.ANNOTATION)); |
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158 | return result; |
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159 | } else { |
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160 | return null; |
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161 | } |
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162 | } |
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163 | |
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164 | @Override |
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165 | public Number getAnnotationOwnerID(Number annotationID) { |
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166 | return annotationDao.getOwner(annotationID); |
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167 | } |
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168 | |
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169 | @Override |
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170 | public User getAnnotationOwner(Number annotationID) { |
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171 | return userDao.getUser(annotationDao.getOwner(annotationID)); |
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172 | } |
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173 | |
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174 | /////////////////////////////////////////////////// |
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175 | // TODO UNIT tests |
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176 | @Override |
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177 | public UserWithPermissionList getPermissions(Number resourceID, Resource resource) { |
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178 | if (resourceID != null) { |
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179 | List<Map<Number, String>> principalsPermissions = this.getDao(resource).getPermissions(resourceID); |
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180 | UserWithPermissionList result = new UserWithPermissionList(); |
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181 | List<UserWithPermission> list = result.getUserWithPermission(); |
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182 | for (Map<Number, String> principalPermission : principalsPermissions) { |
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183 | Number[] principal = new Number[1]; |
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184 | principalPermission.keySet().toArray(principal); |
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185 | UserWithPermission userWithPermission = new UserWithPermission(); |
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186 | userWithPermission.setRef(userDao.getURIFromInternalID(principal[0])); |
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187 | userWithPermission.setPermission(Permission.fromValue(principalPermission.get(principal[0]))); |
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188 | list.add(userWithPermission); |
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189 | } |
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190 | return result; |
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191 | |
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192 | } |
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193 | return null; |
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194 | } |
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195 | |
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196 | //////////////////////////////////////////////////////////////////////// |
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197 | @Override |
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198 | public List<Number> getFilteredAnnotationIDs(UUID ownerId, String link, String text, Number inloggedUserID, String access, String namespace, String after, String before) { |
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199 | |
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200 | Number ownerID = (ownerId != null) ? userDao.getInternalID(ownerId) : null; |
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201 | if (ownerID != null) { |
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202 | if ("owner".equals(access) && !inloggedUserID.equals(ownerID)) { |
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203 | logger.info("The inlogged user cannot be the owner of the annotations owned by " + ownerId.toString()); |
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204 | return null; |
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205 | } |
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206 | } |
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207 | |
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208 | //filtering on tables "target" and "annotations_targets" |
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209 | List<Number> annotationIDsForTargets = null; |
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210 | if (link != null) { |
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211 | List<Number> targetIDs = targetDao.getTargetsReferringTo(link); |
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212 | annotationIDsForTargets = annotationDao.getAnnotationIDsForTargets(targetIDs); |
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213 | if (annotationIDsForTargets == null) { |
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214 | logger.info("There are no annotations for the targets referring to " + link + "."); |
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215 | return null; |
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216 | } |
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217 | } |
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218 | |
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219 | // filtering in the table "annotation" |
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220 | if (ownerID == null && "owner".equals(access)) { |
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221 | ownerID = inloggedUserID; |
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222 | } |
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223 | List<Number> annotationIDs = annotationDao.getFilteredAnnotationIDs(ownerID, text, namespace, after, before); |
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224 | if (annotationIDs != null) { |
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225 | if (annotationIDsForTargets != null) { |
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226 | annotationIDs.retainAll(annotationIDsForTargets); |
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227 | } else { |
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228 | // nothing to filter on link == null |
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229 | } |
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230 | } else { |
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231 | logger.info("There are no annotations for the given filters on the annotation table."); |
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232 | return null; |
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233 | } |
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234 | |
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235 | // filtering on table "annotations_principals_permissions" |
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236 | if ("reader".equals(access) || "writer".equals(access)) { |
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237 | // owner != inloggedUser |
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238 | List<Number> annotationIDsPermission = annotationDao.getAnnotationIDsForUserWithPermission(inloggedUserID, access); |
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239 | if (annotationIDsPermission != null) { |
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240 | annotationIDs.retainAll(annotationIDsPermission); |
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241 | } else { |
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242 | logger.info("There are no annotations for which the inlogged user has access " + access); |
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243 | return null; |
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244 | } |
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245 | } else { |
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246 | // inloggedUser == owner |
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247 | } |
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248 | return annotationIDs; |
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249 | } |
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250 | |
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251 | @Override |
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252 | public ReferenceList getAnnotationTargets(Number annotationID) { |
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253 | ReferenceList result = new ReferenceList(); |
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254 | List<Number> targetIDs = targetDao.retrieveTargetIDs(annotationID); |
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255 | for (Number targetID : targetIDs) { |
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256 | result.getRef().add(targetDao.getURIFromInternalID(targetID)); |
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257 | } |
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258 | return result; |
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259 | } |
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260 | |
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261 | @Override |
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262 | public List<String> getTargetsWithNoCachedRepresentation(Number annotationID) { |
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263 | if (annotationID == null) { |
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264 | return null; |
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265 | } |
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266 | List<String> result = new ArrayList<String>(); |
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267 | List<Number> targetIDs = targetDao.retrieveTargetIDs(annotationID); |
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268 | for (Number targetID : targetIDs) { |
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269 | List<Number> versions = cachedRepresentationDao.getCachedRepresentationsForTarget(targetID); |
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270 | if (versions == null) { |
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271 | result.add(targetDao.getURIFromInternalID(targetID)); |
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272 | } else { |
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273 | if (versions.isEmpty()) { |
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274 | result.add(targetDao.getURIFromInternalID(targetID)); |
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275 | } |
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276 | |
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277 | } |
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278 | } |
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279 | return result; |
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280 | } |
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281 | |
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282 | @Override |
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283 | public List<String> getUsersWithNoInfo(Number annotationID) { |
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284 | if (annotationID == null) { |
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285 | return null; |
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286 | } |
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287 | List<String> result = new ArrayList<String>(); |
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288 | List<Map<Number, String>> usersWithPermissions = annotationDao.getPermissions(annotationID); |
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289 | for (Map<Number, String> userWithPermission : usersWithPermissions) { |
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290 | Number[] userID = new Number[1]; |
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291 | userWithPermission.keySet().toArray(userID); |
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292 | User user = userDao.getUser(userID[0]); |
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293 | |
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294 | if (user.getDisplayName() == null || user.getDisplayName().trim().isEmpty() || user.getEMail() == null || user.getEMail().trim().isEmpty()) { |
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295 | result.add(userDao.getURIFromInternalID(userID[0])); |
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296 | |
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297 | } |
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298 | } |
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299 | return result; |
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300 | } |
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301 | |
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302 | @Override |
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303 | public AnnotationInfoList getFilteredAnnotationInfos(UUID ownerId, String word, String text, Number inloggedUserID, String access, String namespace, String after, String before) { |
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304 | List<Number> annotationIDs = this.getFilteredAnnotationIDs(ownerId, word, text, inloggedUserID, access, namespace, after, before); |
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305 | if (annotationIDs != null) { |
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306 | AnnotationInfoList result = new AnnotationInfoList(); |
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307 | for (Number annotationID : annotationIDs) { |
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308 | AnnotationInfo annotationInfo = annotationDao.getAnnotationInfoWithoutTargets(annotationID); |
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309 | annotationInfo.setTargets(this.getAnnotationTargets(annotationID)); |
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310 | annotationInfo.setOwnerRef(userDao.getURIFromInternalID(annotationDao.getOwner(annotationID))); |
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311 | result.getAnnotationInfo().add(annotationInfo); |
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312 | } |
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313 | |
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314 | return result; |
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315 | } else { |
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316 | return null; |
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317 | } |
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318 | } |
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319 | |
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320 | @Override |
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321 | public AnnotationInfoList getAllAnnotationInfos() { |
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322 | List<Number> annotationIDs = annotationDao.getAllAnnotationIDs(); |
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323 | if (annotationIDs != null) { |
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324 | AnnotationInfoList result = new AnnotationInfoList(); |
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325 | for (Number annotationID : annotationIDs) { |
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326 | Number ownerID = annotationDao.getOwner(annotationID); |
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327 | ReferenceList targets = getAnnotationTargets(annotationID); |
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328 | AnnotationInfo annotationInfo = annotationDao.getAnnotationInfoWithoutTargets(annotationID); |
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329 | annotationInfo.setTargets(targets); |
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330 | if (ownerID != null) { |
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331 | annotationInfo.setOwnerRef(userDao.getURIFromInternalID(ownerID)); |
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332 | } else { |
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333 | annotationInfo.setOwnerRef("ACHTUNG: This annotation does not have an owner in the DB!!!!"); |
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334 | } |
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335 | result.getAnnotationInfo().add(annotationInfo); |
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336 | } |
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337 | |
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338 | return result; |
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339 | } else { |
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340 | return null; |
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341 | } |
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342 | } |
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343 | |
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344 | // TODO unit test |
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345 | @Override |
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346 | public Target getTarget(Number internalID) { |
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347 | Target result = targetDao.getTarget(internalID); |
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348 | result.setSiblingTargets(getTargetsForTheSameLinkAs(internalID)); |
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349 | Map<Number, String> cachedIDsFragments = targetDao.getCachedRepresentationFragmentPairs(internalID); |
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350 | CachedRepresentationFragmentList cachedRepresentationFragmentList = new CachedRepresentationFragmentList(); |
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351 | for (Number key : cachedIDsFragments.keySet()) { |
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352 | CachedRepresentationFragment cachedRepresentationFragment = new CachedRepresentationFragment(); |
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353 | cachedRepresentationFragment.setRef(cachedRepresentationDao.getURIFromInternalID(key)); |
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354 | cachedRepresentationFragment.setFragmentString(cachedIDsFragments.get(key)); |
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355 | cachedRepresentationFragmentList.getCached().add(cachedRepresentationFragment); |
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356 | } |
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357 | result.setCachedRepresentatinons(cachedRepresentationFragmentList); |
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358 | return result; |
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359 | } |
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360 | |
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361 | // TODO unit test |
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362 | @Override |
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363 | public CachedRepresentationInfo getCachedRepresentationInfo(Number internalID) { |
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364 | return cachedRepresentationDao.getCachedRepresentationInfo(internalID); |
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365 | } |
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366 | |
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367 | //TODO unit test |
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368 | @Override |
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369 | public InputStream getCachedRepresentationBlob(Number cachedID) { |
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370 | return cachedRepresentationDao.getCachedRepresentationBlob(cachedID); |
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371 | } |
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372 | |
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373 | @Override |
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374 | public ReferenceList getTargetsForTheSameLinkAs(Number targetID) { |
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375 | List<Number> targetIDs = targetDao.getTargetsForLink(targetDao.getLink(targetID)); |
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376 | ReferenceList referenceList = new ReferenceList(); |
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377 | for (Number siblingID : targetIDs) { |
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378 | referenceList.getRef().add(targetDao.externalIDtoURI(targetDao.getExternalID(siblingID).toString())); |
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379 | } |
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380 | return referenceList; |
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381 | } |
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382 | |
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383 | @Override |
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384 | public User getUser(Number userID) { |
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385 | return userDao.getUser(userID); |
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386 | } |
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387 | |
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388 | @Override |
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389 | public User getUserByInfo(String eMail) { |
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390 | return userDao.getUserByInfo(eMail); |
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391 | } |
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392 | |
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393 | @Override |
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394 | public String getUserRemoteID(Number internalID) { |
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395 | return userDao.getRemoteID(internalID); |
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396 | } |
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397 | |
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398 | @Override |
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399 | public Permission getPermission(Number annotationID, Number userID) { |
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400 | return annotationDao.getPermission(annotationID, userID); |
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401 | } |
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402 | |
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403 | @Override |
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404 | public Number getUserInternalIDFromRemoteID(String remoteID) { |
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405 | return userDao.getUserInternalIDFromRemoteID(remoteID); |
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406 | } |
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407 | |
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408 | @Override |
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409 | public String getTypeOfUserAccount(Number userID) { |
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410 | return userDao.getTypeOfUserAccount(userID); |
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411 | } |
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412 | |
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413 | @Override |
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414 | public User getDataBaseAdmin(){ |
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415 | return userDao.getUser(userDao.getDBAdminID()); |
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416 | } |
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417 | |
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418 | |
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419 | @Override |
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420 | public boolean canRead(Number userID, Number annotationID) { |
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421 | if (userID.equals(annotationDao.getOwner(annotationID)) || userDao.getTypeOfUserAccount(userID).equals(admin)) { |
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422 | return true; |
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423 | } |
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424 | |
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425 | final Permission permission = annotationDao.getPermission(annotationID, userID); |
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426 | if (permission != null) { |
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427 | return (permission.value().equals(Permission.WRITER.value()) || permission.value().equals(Permission.READER.value())); |
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428 | } else { |
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429 | return false; |
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430 | } |
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431 | } |
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432 | |
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433 | @Override |
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434 | public boolean canWrite(Number userID, Number annotationID) { |
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435 | if (userID.equals(annotationDao.getOwner(annotationID)) || userDao.getTypeOfUserAccount(userID).equals(admin)) { |
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436 | return true; |
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437 | } |
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438 | final Permission permission = annotationDao.getPermission(annotationID, userID); |
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439 | if (permission != null) { |
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440 | return (permission.value().equals(Permission.WRITER.value())); |
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441 | } else { |
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442 | return false; |
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443 | } |
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444 | } |
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445 | |
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446 | ////// noetbooks /////// |
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447 | |
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448 | @Override |
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449 | public NotebookInfoList getNotebooks(Number principalID, String permission) { |
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450 | NotebookInfoList result = new NotebookInfoList(); |
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451 | if (permission.equalsIgnoreCase("reader") || permission.equalsIgnoreCase("writer")) { |
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452 | List<Number> notebookIDs = notebookDao.getNotebookIDs(principalID, Permission.fromValue(permission)); |
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453 | for (Number notebookID : notebookIDs) { |
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454 | NotebookInfo notebookInfo = notebookDao.getNotebookInfoWithoutOwner(notebookID); |
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455 | Number ownerID = notebookDao.getOwner(notebookID); |
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456 | notebookInfo.setOwnerRef(userDao.getURIFromInternalID(ownerID)); |
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457 | result.getNotebookInfo().add(notebookInfo); |
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458 | } |
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459 | } else { |
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460 | if (permission.equalsIgnoreCase("owner")) { |
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461 | List<Number> notebookIDs = notebookDao.getNotebookIDsOwnedBy(principalID); |
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462 | String ownerRef = userDao.getURIFromInternalID(principalID); |
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463 | for (Number notebookID : notebookIDs) { |
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464 | NotebookInfo notebookInfo = notebookDao.getNotebookInfoWithoutOwner(notebookID); |
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465 | notebookInfo.setOwnerRef(ownerRef); |
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466 | result.getNotebookInfo().add(notebookInfo); |
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467 | } |
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468 | } else { |
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469 | return null; |
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470 | } |
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471 | } |
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472 | return result; |
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473 | } |
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474 | |
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475 | @Override |
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476 | public boolean hasAccess(Number notebookID, Number principalID, Permission permission) { |
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477 | List<Number> notebookIDs = notebookDao.getNotebookIDs(principalID, permission); |
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478 | if (notebookIDs == null) { |
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479 | return false; |
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480 | } |
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481 | return notebookIDs.contains(notebookID); |
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482 | } |
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483 | |
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484 | @Override |
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485 | public ReferenceList getNotebooksOwnedBy(Number principalID) { |
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486 | ReferenceList result = new ReferenceList(); |
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487 | List<Number> notebookIDs = notebookDao.getNotebookIDsOwnedBy(principalID); |
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488 | for (Number notebookID : notebookIDs) { |
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489 | String reference = notebookDao.getURIFromInternalID(notebookID); |
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490 | result.getRef().add(reference); |
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491 | } |
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492 | return result; |
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493 | } |
---|
494 | |
---|
495 | @Override |
---|
496 | public ReferenceList getPrincipals(Number notebookID, String permission) { |
---|
497 | ReferenceList result = new ReferenceList(); |
---|
498 | List<Number> principalIDs = userDao.getPrincipalIDsWithPermissionForNotebook(notebookID, Permission.fromValue(permission)); |
---|
499 | for (Number principalID : principalIDs) { |
---|
500 | String reference = userDao.getURIFromInternalID(principalID); |
---|
501 | result.getRef().add(reference); |
---|
502 | } |
---|
503 | return result; |
---|
504 | } |
---|
505 | |
---|
506 | @Override |
---|
507 | public Notebook getNotebook(Number notebookID) { |
---|
508 | Notebook result = notebookDao.getNotebookWithoutAnnotationsAndPermissionsAndOwner(notebookID); |
---|
509 | |
---|
510 | result.setOwnerRef(userDao.getURIFromInternalID(notebookDao.getOwner(notebookID))); |
---|
511 | |
---|
512 | ReferenceList annotations = new ReferenceList(); |
---|
513 | List<Number> annotationIDs = annotationDao.getAnnotations(notebookID); |
---|
514 | for (Number annotationID : annotationIDs) { |
---|
515 | annotations.getRef().add(annotationDao.getURIFromInternalID(annotationID)); |
---|
516 | } |
---|
517 | result.setAnnotations(annotations); |
---|
518 | |
---|
519 | UserWithPermissionList ups = new UserWithPermissionList(); |
---|
520 | List<Permission> permissions = new ArrayList<Permission>(); |
---|
521 | permissions.add(Permission.READER); |
---|
522 | permissions.add(Permission.WRITER); |
---|
523 | for (Permission permission : permissions) { |
---|
524 | List<Number> users = userDao.getPrincipalIDsWithPermissionForNotebook(notebookID, permission); |
---|
525 | if (users != null) { |
---|
526 | for (Number user : users) { |
---|
527 | UserWithPermission up = new UserWithPermission(); |
---|
528 | up.setRef(userDao.getURIFromInternalID(user)); |
---|
529 | up.setPermission(permission); |
---|
530 | ups.getUserWithPermission().add(up); |
---|
531 | } |
---|
532 | } |
---|
533 | } |
---|
534 | result.setPermissions(ups); |
---|
535 | return result; |
---|
536 | } |
---|
537 | |
---|
538 | @Override |
---|
539 | public Number getNotebookOwner(Number notebookID) { |
---|
540 | return notebookDao.getOwner(notebookID); |
---|
541 | } |
---|
542 | |
---|
543 | ///////////////////////////////////////////////////////////// |
---|
544 | @Override |
---|
545 | public ReferenceList getAnnotationsForNotebook(Number notebookID, int startAnnotation, int maximumAnnotations, String orderedBy, boolean desc) { |
---|
546 | List<Number> annotationIDs = annotationDao.getAnnotations(notebookID); |
---|
547 | |
---|
548 | if (startAnnotation < -1) { |
---|
549 | logger.info("Variable's startAnnotation value " + startAnnotation + " is invalid. I will return null."); |
---|
550 | return null; |
---|
551 | } |
---|
552 | |
---|
553 | if (maximumAnnotations < -1) { |
---|
554 | logger.info("Variable's maximumAnnotations value " + maximumAnnotations + " is invalid. I will return null."); |
---|
555 | return null; |
---|
556 | } |
---|
557 | |
---|
558 | int offset = (startAnnotation > 0) ? startAnnotation - 1 : 0; |
---|
559 | String direction = desc ? "DESC" : "ASC"; |
---|
560 | List<Number> selectedAnnotIDs = annotationDao.sublistOrderedAnnotationIDs(annotationIDs, offset, maximumAnnotations, orderedBy, direction); |
---|
561 | ReferenceList references = new ReferenceList(); |
---|
562 | for (Number annotationID : selectedAnnotIDs) { |
---|
563 | references.getRef().add(annotationDao.getURIFromInternalID(annotationID)); |
---|
564 | } |
---|
565 | return references; |
---|
566 | } |
---|
567 | |
---|
568 | ///// UPDATERS ///////////////// |
---|
569 | @Override |
---|
570 | public boolean updateAccount(UUID userExternalID, String account) { |
---|
571 | return userDao.updateAccount(userExternalID, account); |
---|
572 | } |
---|
573 | |
---|
574 | @Override |
---|
575 | public int updateAnnotationPrincipalPermission(Number annotationID, Number userID, Permission permission) { |
---|
576 | if (permission != null) { |
---|
577 | return annotationDao.updateAnnotationPrincipalPermission(annotationID, userID, permission); |
---|
578 | } else { |
---|
579 | return annotationDao.deleteAnnotationPrincipalPermission(annotationID, userID); |
---|
580 | } |
---|
581 | } |
---|
582 | |
---|
583 | @Override |
---|
584 | public int updatePermissions(Number annotationID, UserWithPermissionList permissionList) { |
---|
585 | |
---|
586 | List<UserWithPermission> usersWithPermissions = permissionList.getUserWithPermission(); |
---|
587 | int result = 0; |
---|
588 | for (UserWithPermission userWithPermission : usersWithPermissions) { |
---|
589 | Number userID = userDao.getInternalID(UUID.fromString(userDao.stringURItoExternalID(userWithPermission.getRef()))); |
---|
590 | if (userID != null) { |
---|
591 | Permission permission = userWithPermission.getPermission(); |
---|
592 | Permission currentPermission = annotationDao.getPermission(annotationID, userID); |
---|
593 | if (currentPermission != null) { |
---|
594 | if (!permission.value().equals(currentPermission.value())) { |
---|
595 | result = result + annotationDao.updateAnnotationPrincipalPermission(annotationID, userID, permission); |
---|
596 | } |
---|
597 | } else { |
---|
598 | result = result + annotationDao.addAnnotationPrincipalPermission(annotationID, userID, permission); |
---|
599 | } |
---|
600 | } |
---|
601 | } |
---|
602 | |
---|
603 | return result; |
---|
604 | } |
---|
605 | |
---|
606 | // TODO: optimize (not chnaged targets should not be deleted) |
---|
607 | // TODO: unit test |
---|
608 | @Override |
---|
609 | public int updateAnnotation(Annotation annotation) { |
---|
610 | int updatedAnnotations = annotationDao.updateAnnotation(annotation, userDao.getInternalIDFromURI(annotation.getOwnerRef())); |
---|
611 | Number annotationID = annotationDao.getInternalIDFromURI(annotation.getURI()); |
---|
612 | int deletedTargets = annotationDao.deleteAllAnnotationTarget(annotationID); |
---|
613 | int deletedPrinsipalsPermissions = annotationDao.deleteAnnotationPrincipalPermissions(annotationID); |
---|
614 | int addedTargets = addTargets(annotation, annotationID); |
---|
615 | int addedPrincipalsPermissions = addPrincipalsPermissions(annotation.getPermissions().getUserWithPermission(), annotationID); |
---|
616 | return updatedAnnotations; |
---|
617 | } |
---|
618 | |
---|
619 | // TODO: unit test |
---|
620 | @Override |
---|
621 | public int updateAnnotationBody(Number internalID, AnnotationBody annotationBody) { |
---|
622 | String[] body = annotationDao.retrieveBodyComponents(annotationBody); |
---|
623 | return annotationDao.updateAnnotationBody(internalID, body[0], body[1], annotationBody.getXmlBody() != null); |
---|
624 | } |
---|
625 | |
---|
626 | @Override |
---|
627 | public Number updateUser(User user) { |
---|
628 | return userDao.updateUser(user); |
---|
629 | } |
---|
630 | /// notebooks /// |
---|
631 | |
---|
632 | @Override |
---|
633 | public boolean updateNotebookMetadata(Number notebookID, NotebookInfo upToDateNotebookInfo) { |
---|
634 | Number ownerID = userDao.getInternalIDFromURI(upToDateNotebookInfo.getOwnerRef()); |
---|
635 | return notebookDao.updateNotebookMetadata(notebookID, upToDateNotebookInfo.getTitle(), ownerID); |
---|
636 | } |
---|
637 | |
---|
638 | @Override |
---|
639 | public boolean addAnnotationToNotebook(Number notebookID, Number annotationID) { |
---|
640 | return notebookDao.addAnnotationToNotebook(notebookID, annotationID); |
---|
641 | } |
---|
642 | |
---|
643 | /////////////// ADDERS ///////////////////////////////// |
---|
644 | @Override |
---|
645 | public Number[] addCachedForTarget(Number targetID, String fragmentDescriptor, CachedRepresentationInfo cachedInfo, InputStream cachedBlob) { |
---|
646 | Number[] result = new Number[2]; |
---|
647 | result[1] = cachedRepresentationDao.getInternalIDFromURI(cachedInfo.getURI()); |
---|
648 | if (result[1] == null) { |
---|
649 | result[1] = cachedRepresentationDao.addCachedRepresentation(cachedInfo, cachedBlob); |
---|
650 | } |
---|
651 | result[0] = targetDao.addTargetCachedRepresentation(targetID, result[1], fragmentDescriptor); |
---|
652 | return result; |
---|
653 | |
---|
654 | } |
---|
655 | |
---|
656 | // TODo: mapping uri to external ID |
---|
657 | @Override |
---|
658 | public Map<String, String> addTargetsForAnnotation(Number annotationID, List<TargetInfo> targets) { |
---|
659 | Map<String, String> result = new HashMap<String, String>(); |
---|
660 | Number targetIDRunner; |
---|
661 | for (TargetInfo targetInfo : targets) { |
---|
662 | targetIDRunner = targetDao.getInternalIDFromURI(targetInfo.getRef()); |
---|
663 | if (targetIDRunner != null) { |
---|
664 | int affectedRows = annotationDao.addAnnotationTarget(annotationID, targetIDRunner); |
---|
665 | } else { |
---|
666 | Target newTarget = createFreshTarget(targetInfo); |
---|
667 | Number targetID = targetDao.addTarget(newTarget); |
---|
668 | String targetTemporaryID = targetDao.stringURItoExternalID(targetInfo.getRef()); |
---|
669 | result.put(targetTemporaryID, targetDao.getExternalID(targetID).toString()); |
---|
670 | int affectedRows = annotationDao.addAnnotationTarget(annotationID, targetID); |
---|
671 | } |
---|
672 | } |
---|
673 | return result; |
---|
674 | } |
---|
675 | |
---|
676 | @Override |
---|
677 | public Number addUsersAnnotation(Number ownerID, Annotation annotation) { |
---|
678 | Number annotationID = annotationDao.addAnnotation(annotation, ownerID); |
---|
679 | int affectedAnnotRows = addTargets(annotation, annotationID); |
---|
680 | if (annotation.getPermissions() != null) { |
---|
681 | if (annotation.getPermissions().getUserWithPermission() != null) { |
---|
682 | int addedPrincipalsPermissions = this.addPrincipalsPermissions(annotation.getPermissions().getUserWithPermission(), annotationID); |
---|
683 | } |
---|
684 | } |
---|
685 | return annotationID; |
---|
686 | } |
---|
687 | |
---|
688 | @Override |
---|
689 | public Number addUser(User user, String remoteID) { |
---|
690 | if (userDao.userExists(user)) { |
---|
691 | return null; |
---|
692 | } else { |
---|
693 | return userDao.addUser(user, remoteID); |
---|
694 | } |
---|
695 | } |
---|
696 | |
---|
697 | @Override |
---|
698 | public int addAnnotationPrincipalPermission(Number annotationID, Number userID, Permission permission) { |
---|
699 | return annotationDao.addAnnotationPrincipalPermission(annotationID, userID, permission); |
---|
700 | } |
---|
701 | |
---|
702 | //////////// notebooks ////// |
---|
703 | @Override |
---|
704 | public Number createNotebook(Notebook notebook, Number ownerID) { |
---|
705 | Number notebookID = notebookDao.createNotebookWithoutPermissionsAndAnnotations(notebook, ownerID); |
---|
706 | boolean updateOwner = notebookDao.setOwner(notebookID, ownerID); |
---|
707 | List<UserWithPermission> permissions = notebook.getPermissions().getUserWithPermission(); |
---|
708 | for (UserWithPermission principalPermission : permissions) { |
---|
709 | Number principalID = userDao.getInternalIDFromURI(principalPermission.getRef()); |
---|
710 | Permission permission = principalPermission.getPermission(); |
---|
711 | boolean updatePermissions = notebookDao.addPermissionToNotebook(notebookID, principalID, permission); |
---|
712 | } |
---|
713 | return notebookID; |
---|
714 | } |
---|
715 | |
---|
716 | @Override |
---|
717 | public boolean createAnnotationInNotebook(Number notebookID, Annotation annotation, Number ownerID) { |
---|
718 | Number newAnnotationID = this.addUsersAnnotation(ownerID, annotation); |
---|
719 | return notebookDao.addAnnotationToNotebook(notebookID, newAnnotationID); |
---|
720 | } |
---|
721 | |
---|
722 | ////////////// DELETERS ////////////////// |
---|
723 | |
---|
724 | |
---|
725 | |
---|
726 | |
---|
727 | @Override |
---|
728 | public int deleteUser(Number userID) { |
---|
729 | return userDao.deleteUser(userID); |
---|
730 | } |
---|
731 | |
---|
732 | |
---|
733 | @Override |
---|
734 | public int deleteUserSafe(Number userID) { |
---|
735 | return userDao.deleteUserSafe(userID); |
---|
736 | } |
---|
737 | |
---|
738 | @Override |
---|
739 | public int deleteCachedRepresentation(Number internalID) { |
---|
740 | |
---|
741 | if (internalID == null) { |
---|
742 | logger.debug("Cached's internalID is null"); |
---|
743 | return 0; |
---|
744 | } |
---|
745 | |
---|
746 | if (targetDao.cachedIsInUse(internalID)) { |
---|
747 | logger.debug("Cached Repr. is in use, and cannot be deleted."); |
---|
748 | return 0; |
---|
749 | } |
---|
750 | |
---|
751 | return cachedRepresentationDao.deleteCachedRepresentation(internalID); |
---|
752 | }; |
---|
753 | |
---|
754 | |
---|
755 | @Override |
---|
756 | public int[] deleteCachedRepresentationOfTarget(Number versionID, Number cachedID) { |
---|
757 | int[] result = new int[2]; |
---|
758 | result[0] = targetDao.deleteTargetCachedRepresentation(versionID, cachedID); |
---|
759 | if (result[0] > 0) { |
---|
760 | result[1] = cachedRepresentationDao.deleteCachedRepresentation(cachedID); |
---|
761 | } else { |
---|
762 | result[1] = 0; |
---|
763 | |
---|
764 | } |
---|
765 | return result; |
---|
766 | } |
---|
767 | |
---|
768 | @Override |
---|
769 | public int[] deleteAllCachedRepresentationsOfTarget(Number targetID) { |
---|
770 | int[] result = new int[2]; |
---|
771 | result[0] = 0; |
---|
772 | result[1] = 0; |
---|
773 | List<Number> cachedIDs = cachedRepresentationDao.getCachedRepresentationsForTarget(targetID); |
---|
774 | for (Number cachedID : cachedIDs) { |
---|
775 | int[] currentResult = this.deleteCachedRepresentationOfTarget(targetID, cachedID); |
---|
776 | result[0] = result[0] + currentResult[0]; |
---|
777 | result[1] = result[1] + currentResult[1]; |
---|
778 | } |
---|
779 | return result; |
---|
780 | } |
---|
781 | |
---|
782 | @Override |
---|
783 | public int[] deleteAnnotation(Number annotationID) { |
---|
784 | int[] result = new int[5]; |
---|
785 | result[1] = annotationDao.deleteAnnotationPrincipalPermissions(annotationID); |
---|
786 | List<Number> targetIDs = targetDao.retrieveTargetIDs(annotationID); |
---|
787 | result[2] = annotationDao.deleteAllAnnotationTarget(annotationID); |
---|
788 | result[3] = 0; |
---|
789 | if (targetIDs != null) { |
---|
790 | for (Number targetID : targetIDs) { |
---|
791 | this.deleteAllCachedRepresentationsOfTarget(targetID); |
---|
792 | result[3] = result[3] + this.deleteTarget(targetID); |
---|
793 | |
---|
794 | } |
---|
795 | } |
---|
796 | |
---|
797 | result[4] = annotationDao.deleteAnnotationFromAllNotebooks(annotationID); |
---|
798 | |
---|
799 | result[0] = annotationDao.deleteAnnotation(annotationID); |
---|
800 | return result; |
---|
801 | } |
---|
802 | |
---|
803 | ////////////////////// DELETERS //////////////////////// |
---|
804 | @Override |
---|
805 | public int deleteTarget(Number internalID) { |
---|
806 | if (internalID == null) { |
---|
807 | logger.debug("internalID of the target is null."); |
---|
808 | return 0; |
---|
809 | } |
---|
810 | |
---|
811 | if (annotationDao.targetIsInUse(internalID)) { |
---|
812 | logger.debug("The target is in use, and cannot be deleted."); |
---|
813 | return 0; |
---|
814 | } |
---|
815 | |
---|
816 | return targetDao.deleteTarget(internalID); |
---|
817 | |
---|
818 | } |
---|
819 | |
---|
820 | @Override |
---|
821 | public boolean deleteNotebook(Number notebookID) { |
---|
822 | if (notebookDao.deleteAllPermissionsForNotebook(notebookID) || notebookDao.deleteAllAnnotationsFromNotebook(notebookID)) { |
---|
823 | return notebookDao.deleteNotebook(notebookID); |
---|
824 | } else { |
---|
825 | return false; |
---|
826 | } |
---|
827 | } |
---|
828 | |
---|
829 | ////////////// HELPERS //////////////////// |
---|
830 | //////////////////////////////////////// |
---|
831 | @Override |
---|
832 | public ResponseBody makeAnnotationResponseEnvelope(Number annotationID) { |
---|
833 | ResponseBody result = new ResponseBody(); |
---|
834 | Annotation annotation = this.getAnnotation(annotationID); |
---|
835 | result.setAnnotation(annotation); |
---|
836 | List<String> targetsNoCached = this.getTargetsWithNoCachedRepresentation(annotationID); |
---|
837 | ActionList actionList = new ActionList(); |
---|
838 | result.setActionList(actionList); |
---|
839 | actionList.getAction().addAll(makeActionList(targetsNoCached, AnnotationActionName.CREATE_CACHED_REPRESENTATION.value())); |
---|
840 | return result; |
---|
841 | } |
---|
842 | |
---|
843 | @Override |
---|
844 | public ResponseBody makeNotebookResponseEnvelope(Number notebookID) { |
---|
845 | ResponseBody result = new ResponseBody(); |
---|
846 | result.setPermissions(null); |
---|
847 | Notebook notebook = this.getNotebook(notebookID); |
---|
848 | result.setNotebook(notebook); |
---|
849 | return result; |
---|
850 | } |
---|
851 | |
---|
852 | @Override |
---|
853 | public ResponseBody makePermissionResponseEnvelope(Number resourceID, Resource resource) { |
---|
854 | ResponseBody result = new ResponseBody(); |
---|
855 | UserWithPermissionList permissions = this.getPermissions(resourceID, resource); |
---|
856 | result.setPermissions(permissions); |
---|
857 | List<String> usersWithNoInfo = this.getUsersWithNoInfo(resourceID); |
---|
858 | ActionList actionList = new ActionList(); |
---|
859 | result.setActionList(actionList); |
---|
860 | actionList.getAction().addAll(makeActionList(usersWithNoInfo, PermissionActionName.PROVIDE_USER_INFO.value())); |
---|
861 | return result; |
---|
862 | } |
---|
863 | |
---|
864 | private List<Action> makeActionList(List<String> resourceURIs, String message) { |
---|
865 | if (resourceURIs != null) { |
---|
866 | if (resourceURIs.isEmpty()) { |
---|
867 | return (new ArrayList<Action>()); |
---|
868 | } else { |
---|
869 | List<Action> result = new ArrayList<Action>(); |
---|
870 | for (String resourceURI : resourceURIs) { |
---|
871 | Action action = new Action(); |
---|
872 | result.add(action); |
---|
873 | action.setMessage(message); |
---|
874 | action.setObject(resourceURI); |
---|
875 | } |
---|
876 | return result; |
---|
877 | } |
---|
878 | } else { |
---|
879 | return null; |
---|
880 | } |
---|
881 | } |
---|
882 | |
---|
883 | //// priveee /// |
---|
884 | private Target createFreshTarget(TargetInfo targetInfo) { |
---|
885 | Target target = new Target(); |
---|
886 | target.setLink(targetInfo.getLink()); |
---|
887 | target.setVersion(targetInfo.getVersion()); |
---|
888 | return target; |
---|
889 | } |
---|
890 | |
---|
891 | private int addTargets(Annotation annotation, Number annotationID) { |
---|
892 | List<TargetInfo> targets = annotation.getTargets().getTargetInfo(); |
---|
893 | Map<String, String> targetIdPairs = addTargetsForAnnotation(annotationID, targets); |
---|
894 | AnnotationBody annotationBody = annotation.getBody(); |
---|
895 | String bodyText; |
---|
896 | String newBodyText; |
---|
897 | String mimeType; |
---|
898 | if (annotationBody.getXmlBody() != null) { |
---|
899 | bodyText = Helpers.elementToString(annotation.getBody().getXmlBody().getAny()); |
---|
900 | mimeType = annotationBody.getXmlBody().getMimeType(); |
---|
901 | } else { |
---|
902 | if (annotation.getBody().getTextBody() != null) { |
---|
903 | bodyText = annotation.getBody().getTextBody().getBody(); |
---|
904 | mimeType = annotationBody.getTextBody().getMimeType(); |
---|
905 | } else { |
---|
906 | logger.error("The client has sent ill-formed annotation body."); |
---|
907 | return -1; |
---|
908 | } |
---|
909 | } |
---|
910 | newBodyText = Helpers.replace(bodyText, targetIdPairs); |
---|
911 | return annotationDao.updateAnnotationBody(annotationID, newBodyText, mimeType, annotationBody.getXmlBody() != null); |
---|
912 | } |
---|
913 | |
---|
914 | private int addPrincipalsPermissions(List<UserWithPermission> permissions, Number annotationID) { |
---|
915 | int addedPermissions = 0; |
---|
916 | for (UserWithPermission permission : permissions) { |
---|
917 | addedPermissions = addedPermissions + annotationDao.addAnnotationPrincipalPermission(annotationID, userDao.getInternalIDFromURI(permission.getRef()), permission.getPermission()); |
---|
918 | |
---|
919 | } |
---|
920 | return addedPermissions; |
---|
921 | } |
---|
922 | |
---|
923 | private TargetInfo getTargetInfoFromTarget(Target target) { |
---|
924 | TargetInfo targetInfo = new TargetInfo(); |
---|
925 | targetInfo.setRef(target.getURI()); |
---|
926 | targetInfo.setLink(target.getLink()); |
---|
927 | targetInfo.setVersion(target.getVersion()); |
---|
928 | return targetInfo; |
---|
929 | } |
---|
930 | } |
---|